BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034G02LP1|AL429944
(862 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig917 362 e-100
>3x_Contig917
Length = 3433
Score = 362 bits (176), Expect = e-100
Identities = 285/339 (84%), Gaps = 5/339 (1%)
Strand = Plus / Plus
Query: 1 acgaatcagacgcagcgtmcctatgggacc-aaactacgaaaaccaatttggaaacgtat 59
||||||| | ||| |||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3066 acgaatctgtcgctgcgtccctatgggacccaaactacgaaaaccaatttggaaacgtat 3125
Query: 60 aggcaaamcaatcacatwgcctatcctctwaammaacaatacmmtcagaacawaccgcag 119
|||||| ||||||||| ||||||||||| || |||| ||| |||||||| |||||||
Sbjct: 3126 -ggcaaaccaatcacattgcctatcctcttaaccaacattaccctcagaacataccgcag 3184
Query: 120 ccttcatmtmagcgtmcgtmgcaaagtagcgagcatcaacaagaacaggtacwaamatta 179
||||||| | ||||| ||| |||||||||||||| |||||||| ||||| || |||
Sbjct: 3185 ccttcatctcagcgtccgtcgcaaagtagcgagcttcaacaag--tcggtactaacattc 3242
Query: 180 aamwatgwcatccacmwaaacgcactcawacg-acaaaagtaaatgmaaggagcggtaat 238
|| ||| ||||||| ||||||||||| ||| ||||| | ||||| |||||||||||||
Sbjct: 3243 aactatgtcatccacctaaacgcactcatacgtacaaatgaaaatgcaaggagcggtaat 3302
Query: 239 wmagwgamagaatcggtggmcggmtctgtttcagactctgtmamtraatcmgaaatggac 298
|| || ||||||||||| ||| ||||||||| ||||||| | | |||| ||||||||
Sbjct: 3303 tcagtgacagaatcggtggccggctctgtttcacactctgtcactgaatccgaaatggaa 3362
Query: 299 tcggagtttgctgaaagarctaactccatgtmaagtttt 337
|||||||||||| ||| | |||||||||||| || ||||
Sbjct: 3363 tcggagtttgctcaaacagctaactccatgtcaactttt 3401
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.719 1.35
Gapped
Lambda K H
1.43 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4080
Number of Sequences: 1807
Number of extensions: 4080
Number of successful extensions: 99
Number of sequences better than 1.0e-20: 1
length of query: 862
length of database: 10,358,551
effective HSP length: 16
effective length of query: 846
effective length of database: 10,329,639
effective search space: 8738874594
effective search space used: 8738874594
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 49 (101.4 bits)